Louse 12S rRNA secondary structure

This page lists the data sets used in unpublished manuscript "Louse (Insecta: Phthiraptera) mitochondrial 12S rRNA secondary structure is highly variable" (Roderic D. M. Page, Robert Cruickshank, and Kevin P. Johnson) (available as Technical Reports in Taxonomy 02-01)

Structures

Drawings of the secondary structures can be found here.

Vienna RNA format file of 23 louse 12S rRNA sequences with secondary structure indicated

Skeleton files

This file can be used by the program RnaViz to speed up drawing secondary structures.

Skeleton for louse domain III

Alignments

DCSE format file of 25 louse 12S rRNA sequences with secondary structure indicated

NEXUS file with aligned 12S rRNA, EF1a and COI sequences

SSE format file (XML)

Related sites

• Insect 12S rRNA secondary structure prediction
• Insect 12S structure data files
• Old louse 12S secondray structure database

[Rod Page's home page]