These files are used in the analysis of insect 12S rRNA secondary structure published in Page, R. D. M. (2000). Comparative analysis of secondary structure of insect mitochondrial small subunit ribosomal RNA using maximum weighted matching. Nucleic Acids Research 28: 3839-3845. [reprint]
NEXUS format with taxonomic groups and sources indicated
DCSE format with secondary structure indicated
This file can be used by the program RnaViz to speed up drawing secondary structures.
Skeleton for domain III
Insect 12S rRNA secondary structure prediction
This experimental server takes a domain III 12S rRNA sequence and returns a suggested structure.
|Software to view RNA secondary structures|
|DCSE (Dedicated Sequence Alignment Editor)|
|Robin Gutell's Comparative RNA Web Site|
|SSU rRNA database|
|RNA structure logos|
[Rod Page's home page]