If you are using a Mac then you can download .ct files directly into Don Gilbert's program loopDloop. To do this you need to associate files of the MIME type "application/x-ct" with the loopDloop application. The simplest way to do this is as follows:
After running an RNAlign server job, click on the link to a ct file. Netscape will display a dialog like this:
Click on the Pick app button and find the loopDloop application. Click on the Open button
That's it! Netscape should now open ct files directly into loopDloop.
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